{"id":272,"date":"2014-09-24T10:07:57","date_gmt":"2014-09-24T14:07:57","guid":{"rendered":"http:\/\/scholarblogs.emory.edu\/whscl-news\/?p=272"},"modified":"2014-09-24T10:07:57","modified_gmt":"2014-09-24T14:07:57","slug":"ncbi-two-day-workshop","status":"publish","type":"post","link":"https:\/\/scholarblogs.emory.edu\/whscl-news\/?p=272","title":{"rendered":"WHSC Library to host NCBI Two Day Workshop"},"content":{"rendered":"<p align=\"center\"><b>The Woodruff Health Sciences Library<\/b><\/p>\n<p align=\"center\">\u00a0Announces a special short course:<\/p>\n<p align=\"center\"><b>NCBI <\/b><b>Resources for Analyzing Human Variation Data<\/b><\/p>\n<p align=\"center\">\n<p align=\"center\"><b>October 8-9, 2014<\/b><\/p>\n<p align=\"center\">Wednesday 9:00 am-1pm and 3-5:00pm<\/p>\n<p align=\"center\">Thursday 9:00 am-1pm and 3-5:00pm<\/p>\n<p align=\"center\">\n<p align=\"center\">Woodruff Health Sciences Library Computer Classroom B65<\/p>\n<p align=\"center\">Presented by:\u00a0 Ben Busby, PhD, Genomics Outreach Coordinator, NCBI<\/p>\n<p align=\"center\">\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0 Wayne Matten, PhD, Public Services Section, NCBI<\/p>\n<p align=\"center\"><b>This short course is for those interested in using NCBI resources to analyze publicly available genomic datasets and their own data.\u00a0 The course will focus on human genomic variation in relation to human health<\/b><\/p>\n<p><b>Note: Participants will need to bring a wi-fi-enabled laptop to class. <\/b><\/p>\n<p>Registration is via the Health Sciences Library Workshop Calendar (Please sign up for each day separately): <a href=\"http:\/\/health.library.emory.edu\/training\/workshops-classes\/index.html\">http:\/\/health.library.emory.edu\/training\/workshops-classes\/index.html<\/a><\/p>\n<p>Drs. Busby and Matten will also be available for short consultations with attendees and other Emory investigators from 12:00-3:00 pm on October 8<sup>th<\/sup> and 9th.<\/p>\n<p>For additional information or to schedule a 20-minute consultation, contact Jeremy Kupsco, <a href=\"javascript:secureDecryptAndNavigate('GzMdaPJ1G\/i9cT8g7Mpto3eKdfpDXiwcXEbFEYW3MCLLGOeoYKnFwHG+f7cNlP4wX+rEUCMFYhxdVqW5Toe\/\/7Gze3lQMN0o', '00d867460bc8ce9e302254bf3677aed43b71f7049b319eaaea2b020f6d17dd6d')\">jkupsco [at] emory [dot] edu<\/a><\/p>\n<p>&nbsp;<\/p>\n<p><i>Day 1 <\/i><\/p>\n<p><i>Session 1 (9:00 am -12:45 pm)<\/i><\/p>\n<ul>\n<li>Introduction to NCBI Genomics and Variation Resources (9:00-10:45 am)<\/li>\n<li>NCBI Health Resources Workflow (11 am-12pm)<\/li>\n<li>Introduction to new BLAST Resources (12 -12:45 pm)<\/li>\n<\/ul>\n<p><i>Session 2 (3:00 pm -5:00 pm)<\/i><\/p>\n<ul>\n<li>NCBI Blast Resources (SRA-BLAST for NGS\/moleBLAST for Metagenomes\/BLAST in the Cloud).\u00a0\u00a0Students will work in small groups, and rotate between 2 projects\/exercise sets.<\/li>\n<\/ul>\n<p><i>Day 2 <\/i><\/p>\n<p><i>Session 1 (9:00 am-1:00 pm)<\/i><\/p>\n<ul>\n<li>DbGaP, Beacon (indexing every position in the human genome for &gt;800,000 individuals!), 1000 Genomes Browser, GO-ESP and GRU variant filtering.\u00a0\u00a0(9-10:30 am)<\/li>\n<li>Pubmed to genomes demo (11 am-12 pm)<\/li>\n<li>Introduction to NCBI Variation Portal (12-1:00 pm)<\/li>\n<\/ul>\n<p>Session 2 (3:00pm \u2013 5 pm)<\/p>\n<p>Hands on\/Demo &#8212; NCBI Variation Resources; working with .vcf files<\/p>\n","protected":false},"excerpt":{"rendered":"<p>The Woodruff Health Sciences Library \u00a0Announces a special short course: NCBI Resources for Analyzing Human Variation Data October 8-9, 2014 Wednesday 9:00 am-1pm and 3-5:00pm Thursday 9:00 am-1pm and 3-5:00pm Woodruff Health Sciences Library Computer Classroom B65 Presented by:\u00a0 Ben Busby, PhD, Genomics Outreach Coordinator, NCBI \u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0 Wayne Matten, PhD, Public Services Section, NCBI This <a class=\"more-link\" href=\"https:\/\/scholarblogs.emory.edu\/whscl-news\/?p=272\">Read More &#8230;<\/a><\/p>\n","protected":false},"author":1431,"featured_media":0,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"_monsterinsights_skip_tracking":false,"_monsterinsights_sitenote_active":false,"_monsterinsights_sitenote_note":"","_monsterinsights_sitenote_category":0,"jetpack_post_was_ever_published":false,"_jetpack_newsletter_access":"","_jetpack_dont_email_post_to_subs":false,"_jetpack_newsletter_tier_id":0,"_jetpack_memberships_contains_paywalled_content":false,"_jetpack_memberships_contains_paid_content":false,"footnotes":""},"categories":[5],"tags":[23],"class_list":["post-272","post","type-post","status-publish","format-standard","hentry","category-news","tag-workshops"],"jetpack_featured_media_url":"","jetpack_sharing_enabled":true,"_links":{"self":[{"href":"https:\/\/scholarblogs.emory.edu\/whscl-news\/index.php?rest_route=\/wp\/v2\/posts\/272","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/scholarblogs.emory.edu\/whscl-news\/index.php?rest_route=\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/scholarblogs.emory.edu\/whscl-news\/index.php?rest_route=\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/scholarblogs.emory.edu\/whscl-news\/index.php?rest_route=\/wp\/v2\/users\/1431"}],"replies":[{"embeddable":true,"href":"https:\/\/scholarblogs.emory.edu\/whscl-news\/index.php?rest_route=%2Fwp%2Fv2%2Fcomments&post=272"}],"version-history":[{"count":2,"href":"https:\/\/scholarblogs.emory.edu\/whscl-news\/index.php?rest_route=\/wp\/v2\/posts\/272\/revisions"}],"predecessor-version":[{"id":274,"href":"https:\/\/scholarblogs.emory.edu\/whscl-news\/index.php?rest_route=\/wp\/v2\/posts\/272\/revisions\/274"}],"wp:attachment":[{"href":"https:\/\/scholarblogs.emory.edu\/whscl-news\/index.php?rest_route=%2Fwp%2Fv2%2Fmedia&parent=272"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/scholarblogs.emory.edu\/whscl-news\/index.php?rest_route=%2Fwp%2Fv2%2Fcategories&post=272"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/scholarblogs.emory.edu\/whscl-news\/index.php?rest_route=%2Fwp%2Fv2%2Ftags&post=272"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}